EnhancerDB
  1. Home
  2. SNP
  3. rs561566442[chr6:30728636]
Enhancers that have rs561566442[chr6:30728636]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561566442[chr6:30728636]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30728617 30728638 IRF1 JASPAR yes 101045552
chr6 30728623 30728638 FOXP1 JASPAR yes 101045556
chr6 30728623 30728644 IRF1 JASPAR yes 101045557
chr6 30728625 30728640 PRDM1 JASPAR yes 101045558
chr6 30728625 30728646 IRF1 JASPAR yes 101045559
chr6 30728630 30728645 FOXP1 JASPAR yes 101045560
chr6 30728631 30728646 STAT2 JASPAR yes 101045561
chr6 30728632 30728647 FOXP1 JASPAR yes 101045562
chr6 30728634 30728649 FOXP1 JASPAR yes 101045563
Genes associated with rs561566442[chr6:30728636], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More