EnhancerDB
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  3. rs561594130[chr1:110440944]
Enhancers that have rs561594130[chr1:110440944]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs561594130[chr1:110440944]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110440151 110441770 TEF1 GTRD no Bone (Osteoblast) 21328471
chr1 110440151 110441770 TEF1 GTRD no Bone (Osteoblast) 107820648
chr1 110440344 110440994 TCF7L2 GTRD no Colon (HCT116) 107820652
chr1 110440684 110441306 ZNF274 GTRD no Cervix (HeLa-S3) 21328473
chr1 110440746 110441148 ZNF274 GTRD no Liver (HepG2) 21328474
chr1 110440765 110441271 ZNF274 GTRD no Bone Marrow (K562) 21328475
chr1 110440767 110441328 ZNF274 GTRD no Cervix (HeLa-S3) 21328476
chr1 110440813 110442358 ZNF274 GTRD no Cervix (HeLa-S3) 21328477
chr1 110440836 110441357 ZNF274 GTRD no Cervix (HeLa-S3) 21328478
chr1 110440846 110441278 ZNF274 GTRD no Bone Marrow (K562) 21328479
chr1 110440858 110441222 ZNF274 GTRD no Liver (HepG2) 21328480
chr1 110440859 110441206 ZNF274 GTRD no Liver (HepG2) 21328481
chr1 110440869 110441274 ZNF274 GTRD no Liver (HepG2) 21328482
chr1 110440871 110441140 ZNF274 GTRD no Liver (HepG2) 21328483
chr1 110440908 110441126 ZNF274 GTRD no Liver (HepG2) 21328484
chr1 110440939 110440950 FOXA1 JASPAR yes 31451642
chr1 110440939 110440954 FOXA1 JASPAR yes 31451643
chr1 110440940 110440951 FOXB1 JASPAR yes 31451644
chr1 110440940 110440951 FOXC1 JASPAR yes 31451645
chr1 110440940 110440952 FOXC2 JASPAR yes 31451646
chr1 110440940 110441364 ZNF274 GTRD no Bone Marrow (K562) 21328485
chr1 110440942 110440954 HNF1B JASPAR yes 31451647
Genes associated with rs561594130[chr1:110440944], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More