EnhancerDB
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  3. rs561601788[chr12:52608096]
Enhancers that have rs561601788[chr12:52608096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561601788[chr12:52608096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 21546725
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 108033682
chr12 52607436 52608287 ZNF143 GTRD no Epithelial (MCF-7) 21546751
chr12 52607463 52608228 ZNF143 GTRD no Epithelial (MCF-7) 21546752
chr12 52607497 52608217 ZNF143 GTRD no Epithelial (MCF-7) 21546754
chr12 52607936 52608613 TCF7L2 GTRD no Colon (HCT116) 21546758
chr12 52608081 52608574 TCF7L2 GTRD no Colon (HCT116) 21546759
chr12 52608087 52608546 TCF7L2 GTRD no Colon (HCT116) 21546760
chr12 52608093 52608103 MAX JASPAR yes 120928913
Genes associated with rs561601788[chr12:52608096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More