EnhancerDB
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  3. rs561640574[chr6:13467352]
Enhancers that have rs561640574[chr6:13467352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13451065 13468999 enh8964
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs561640574[chr6:13467352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13467337 13467352 MEF2C JASPAR yes 100035515
chr6 13467340 13467355 FOXP1 JASPAR yes 100035516
chr6 13467342 13467357 FOXP1 JASPAR yes 100035517
chr6 13467342 13467363 IRF1 JASPAR yes 100035518
chr6 13467346 13467360 SPI1 JASPAR yes 100035519
Genes associated with rs561640574[chr6:13467352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More