EnhancerDB
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  3. rs56164119[chr1:229343780]
Enhancers that have rs56164119[chr1:229343780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229330645 229348935 enh12763
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Ovary Blood (T-cell) Esophagus Brain (SK-N-MC) Stomach Muscle (A673) Placenta Uterus Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs56164119[chr1:229343780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229340812 229343905 ZNF143 GTRD no Epithelial (MCF-7) 21390638
chr1 229340812 229343905 ZNF143 GTRD no Epithelial (MCF-7) 107877861
chr1 229341112 229343833 ZNF274 GTRD no Bone Marrow (K562) 107877868
chr1 229341115 229343944 ZNF274 GTRD no Bone Marrow (K562) 107877869
chr1 229341125 229343786 ZNF274 GTRD no Bone Marrow (K562) 107877871
chr1 229341155 229343869 ZNF274 GTRD no Liver (HepG2) 21390641
chr1 229341155 229343869 ZNF274 GTRD no Liver (HepG2) 107877876
chr1 229341193 229343881 ZBTB33 GTRD no Lung (A549) 107877887
chr1 229341197 229343831 ZNF274 GTRD no Blood (GM12878) 107877889
chr1 229341234 229343794 ZNF274 GTRD no Blood (GM12878) 107877899
chr1 229341313 229343986 ZNF274 GTRD no Liver (HepG2) 21390661
chr1 229341313 229343986 ZNF274 GTRD no Liver (HepG2) 107877926
chr1 229342121 229343867 ZNF274 GTRD no Liver (HepG2) 21390693
chr1 229342756 229343808 ZNF274 GTRD no Cervix (HeLa-S3) 21390718
chr1 229342924 229343825 GATA3 GTRD no Thymus 21390720
chr1 229343133 229343971 ZNF274 GTRD no Liver (HepG2) 21390722
chr1 229343213 229343946 ZNF274 GTRD no Cervix (HeLa-S3) 21390725
chr1 229343773 229343783 NFATC3 JASPAR yes 35974410
chr1 229343780 229343790 POU6F2 JASPAR yes 35974411
Genes associated with rs56164119[chr1:229343780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More