EnhancerDB
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  3. rs56166055[chr1:95259581]
Enhancers that have rs56166055[chr1:95259581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95254882 95276775 enh12082
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs56166055[chr1:95259581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95259569 95259590 IRF1 JASPAR yes 30916937
chr1 95259571 95259586 PRDM1 JASPAR yes 30916938
chr1 95259571 95259586 STAT2 JASPAR yes 30916939
chr1 95259575 95259596 IRF1 JASPAR yes 30916941
chr1 95259576 95259591 FOXP1 JASPAR yes 30916942
chr1 95259576 95259597 IRF1 JASPAR yes 30916943
chr1 95259579 95259583 YY1 TRANSFAC yes 30916944
chr1 95259580 95259595 FOXP1 JASPAR yes 30916945
chr1 95259581 95259596 FOXP1 JASPAR yes 30916946
Genes associated with rs56166055[chr1:95259581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More