EnhancerDB
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  3. rs561665588[chr2:233454294]
Enhancers that have rs561665588[chr2:233454294]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 233450537 233460339 enh34400
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung (A549) Colon (HCT116) Thyroid Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Stomach
Transcript factors that have rs561665588[chr2:233454294]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 233454284 233454294 EMX1 JASPAR yes 81781918
chr2 233454284 233454294 EMX2 JASPAR yes 81781919
chr2 233454284 233454294 ESX1 JASPAR yes 81781920
chr2 233454284 233454294 GSX1 JASPAR yes 81781921
chr2 233454284 233454294 GSX2 JASPAR yes 81781922
chr2 233454284 233454294 HESX1 JASPAR yes 81781923
chr2 233454284 233454294 HOXB2 JASPAR yes 81781924
chr2 233454284 233454294 HOXB3 JASPAR yes 81781925
chr2 233454284 233454294 LBX2 JASPAR yes 81781926
chr2 233454284 233454294 LHX2 JASPAR yes 81781927
chr2 233454284 233454294 LHX6 JASPAR yes 81781928
chr2 233454284 233454294 MIXL1 JASPAR yes 81781929
chr2 233454284 233454294 MNX1 JASPAR yes 81781930
chr2 233454284 233454294 NOTO JASPAR yes 81781931
chr2 233454284 233454294 POU6F1 JASPAR yes 81781932
chr2 233454284 233454294 RAX JASPAR yes 81781933
chr2 233454285 233454299 POU1F1 JASPAR yes 81781944
chr2 233454286 233454299 POU3F3 JASPAR yes 81781945
chr2 233454293 233454304 PHOX2A JASPAR yes 81781947
chr2 233454293 233454304 PROP1 JASPAR yes 81781948
chr2 233454294 233454304 PAX3 JASPAR yes 81781949
chr2 233454294 233454304 PAX7 JASPAR yes 81781950
Genes associated with rs561665588[chr2:233454294], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More