EnhancerDB
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  3. rs561690412[chr12:53272735]
Enhancers that have rs561690412[chr12:53272735]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53249369 53285465 enh14733
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs561690412[chr12:53272735]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53272605 53273178 ZNF274 GTRD no Bone Marrow (K562) 21547975
chr12 53272699 53273369 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108034804
chr12 53272727 53272741 TLX1 JASPAR yes 120958316
Genes associated with rs561690412[chr12:53272735], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More