EnhancerDB
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  3. rs561809050[chr1:2183529]
Enhancers that have rs561809050[chr1:2183529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561809050[chr1:2183529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2183511 2183531 ESR1 JASPAR yes 26227179
chr1 2183514 2183532 ESR1 JASPAR yes 26227180
chr1 2183514 2183532 ESR2 JASPAR yes 26227181
chr1 2183527 2183541 GLIS2 JASPAR yes 26227182
chr1 2183527 2183541 GLIS3 JASPAR yes 26227183
chr1 2183527 2183541 ZIC1 JASPAR yes 26227184
chr1 2183527 2183542 ZIC3 JASPAR yes 26227185
chr1 2183527 2183542 ZIC4 JASPAR yes 26227186
Genes associated with rs561809050[chr1:2183529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More