EnhancerDB
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  3. rs561812336[chr1:19255425]
Enhancers that have rs561812336[chr1:19255425]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561812336[chr1:19255425]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19255414 19255427 TFAP2A JASPAR yes 27162167
chr1 19255414 19255427 TFAP2B JASPAR yes 27162168
chr1 19255414 19255427 TFAP2C JASPAR yes 27162169
Genes associated with rs561812336[chr1:19255425], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More