EnhancerDB
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  3. rs561856858[chr5:169764509]
Enhancers that have rs561856858[chr5:169764509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 169752285 169768135 enh22792
Cervix (HeLa-S3) Blood (T-cell) Esophagus Lung Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Uterus Breast Neural Stem Cells (H9) Thymus Heart
chr5 169764143 169764665 vista50082
VISTA
Transcript factors that have rs561856858[chr5:169764509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 169764488 169764509 IRF1 JASPAR yes 67686662
chr5 169764488 169764509 IRF1 JASPAR yes 70758855
chr5 169764494 169764515 IRF1 JASPAR yes 67686666
chr5 169764494 169764515 IRF1 JASPAR yes 70758859
chr5 169764496 169764511 STAT2 JASPAR yes 67686667
chr5 169764496 169764511 STAT2 JASPAR yes 70758860
chr5 169764498 169764510 IRF1 JASPAR yes 67686668
chr5 169764498 169764510 IRF1 JASPAR yes 70758861
chr5 169764500 169764515 FOXP1 JASPAR yes 67686670
chr5 169764500 169764515 FOXP1 JASPAR yes 70758863
Genes associated with rs561856858[chr5:169764509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More