EnhancerDB
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  3. rs561857905[chr1:155188758]
Enhancers that have rs561857905[chr1:155188758]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155186185 155200282 enh647
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs561857905[chr1:155188758]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155187998 155188884 ZNF143 GTRD no Epithelial (MCF-7) 21341344
chr1 155188101 155188900 ZNF143 GTRD no Epithelial (MCF-7) 21341346
chr1 155188178 155188875 ZNF143 GTRD no Epithelial (MCF-7) 21341347
chr1 155188195 155188904 ZNF143 GTRD no Epithelial (MCF-7) 21341348
chr1 155188235 155188831 ZNF143 GTRD no Epithelial (MCF-7) 21341349
chr1 155188263 155188892 TCF7L2 GTRD no Colon (HCT116) 21341350
chr1 155188276 155188809 ZNF143 GTRD no Epithelial (MCF-7) 21341351
chr1 155188303 155188781 ZNF143 GTRD no Epithelial (MCF-7) 21341352
chr1 155188332 155188856 ZNF143 GTRD no Epithelial (MCF-7) 21341353
chr1 155188490 155189040 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341354
chr1 155188610 155188966 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341355
chr1 155188645 155189001 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21341356
chr1 155188648 155189124 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341357
chr1 155188676 155189001 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341358
chr1 155188677 155188987 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21341359
chr1 155188742 155188972 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21341360
chr1 155188748 155188759 GCM1 JASPAR yes 32335647
Genes associated with rs561857905[chr1:155188758], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More