EnhancerDB
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  3. rs56187327[chr3:56954620]
Enhancers that have rs56187327[chr3:56954620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56948005 56967995 enh7237
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs56187327[chr3:56954620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56954615 56954630 HNF4A JASPAR yes 2611330
chr3 56954616 56954630 RXRG JASPAR yes 2611331
chr3 56954616 56954631 HNF4G JASPAR yes 2611332
Genes associated with rs56187327[chr3:56954620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More