EnhancerDB
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  3. rs561876279[chr1:231524403]
Enhancers that have rs561876279[chr1:231524403]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561876279[chr1:231524403]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231524385 231524405 RREB1 JASPAR yes 36087940
chr1 231524387 231524407 RREB1 JASPAR yes 36087941
chr1 231524390 231524410 RREB1 JASPAR yes 36087942
chr1 231524393 231524413 RREB1 JASPAR yes 36087943
chr1 231524396 231524416 RREB1 JASPAR yes 36087945
chr1 231524399 231524419 RREB1 JASPAR yes 36087946
chr1 231524402 231524422 RREB1 JASPAR yes 36087947
Genes associated with rs561876279[chr1:231524403], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More