EnhancerDB
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  3. rs56194046[chr19:13966374]
Enhancers that have rs56194046[chr19:13966374]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56194046[chr19:13966374]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13964390 13966469 AR GTRD no Prostate (PC-3) 21852771
chr19 13965258 13967317 ZNF143 GTRD no Epithelial (MCF-7) 21852778
chr19 13965460 13967356 ZNF143 GTRD no Epithelial (MCF-7) 21852781
chr19 13965470 13966728 ZNF143 GTRD no Epithelial (MCF-7) 21852783
chr19 13966111 13966895 TCF7L2 GTRD no Colon (HCT116) 21852785
chr19 13966125 13966798 ZNF143 GTRD no Epithelial (MCF-7) 21852786
chr19 13966153 13966788 ZNF143 GTRD no Epithelial (MCF-7) 21852787
chr19 13966220 13966804 ZNF143 GTRD no Epithelial (MCF-7) 21852788
chr19 13966256 13966732 ZNF274 GTRD no Bone Marrow (K562) 21852789
chr19 13966329 13966664 ZNF143 GTRD no Epithelial (MCF-7) 21852790
chr19 13966356 13966706 ZNF274 GTRD no Cervix (HeLa-S3) 21852791
chr19 13966357 13966375 NR3C1 JASPAR yes 112539173
chr19 13966362 13966383 IRF1 JASPAR yes 112539174
chr19 13966364 13966379 PRDM1 JASPAR yes 112539175
chr19 13966364 13966379 STAT2 JASPAR yes 112539176
chr19 13966366 13966380 IRF8 JASPAR yes 112539177
chr19 13966372 13966376 YY1 TRANSFAC yes 112539178
chr19 13966372 13966654 ZNF274 GTRD no Bone Marrow (K562) 21852792
Genes associated with rs56194046[chr19:13966374], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More