EnhancerDB
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  3. rs561960353[chr16:29270446]
Enhancers that have rs561960353[chr16:29270446]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs561960353[chr16:29270446]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29270435 29270450 TFAP2A JASPAR yes 10254811
chr16 29270438 29270450 TFAP2A JASPAR yes 10254812
chr16 29270438 29270450 TFAP2B JASPAR yes 10254813
chr16 29270438 29270450 TFAP2C JASPAR yes 10254814
chr16 29270440 29270449 TFAP2A JASPAR yes 10254815
chr16 29270442 29270451 THAP1 JASPAR yes 10254816
chr16 29270445 29270449 LFA1 TRANSFAC yes 10254817
Genes associated with rs561960353[chr16:29270446], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More