EnhancerDB
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  3. rs561996625[chr1:225653831]
Enhancers that have rs561996625[chr1:225653831]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561996625[chr1:225653831]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225650829 225656613 ZBTB33 GTRD no Lung (A549) 107874230
chr1 225651086 225654242 ZBTB33 GTRD no Brain (SK-N-SH) 21384816
chr1 225651124 225656651 ZBTB33 GTRD no Lung (A549) 107874231
chr1 225651156 225656546 ZBTB33 GTRD no Lung (A549) 107874232
chr1 225651177 225654374 ZBTB33 GTRD no Brain (SK-N-SH) 21384819
chr1 225651333 225654603 ZBTB33 GTRD no Brain (SK-N-SH) 21384826
chr1 225651356 225654907 ZBTB33 GTRD no Lung (A549) 107874233
chr1 225651415 225654922 ZBTB33 GTRD no Lung (A549) 107874234
chr1 225651543 225654917 ZBTB33 GTRD no Lung (A549) 107874235
chr1 225651552 225654335 ZBTB33 GTRD no Brain (SK-N-SH) 21384836
chr1 225651591 225654242 ZNF274 GTRD no Liver (HepG2) 21384837
chr1 225651913 225654315 ZBTB33 GTRD no Brain (SK-N-SH) 21384848
chr1 225651932 225654158 ZNF274 GTRD no Liver (HepG2) 21384850
chr1 225651972 225654359 ZNF274 GTRD no Liver (HepG2) 21384853
chr1 225652004 225654254 ZNF274 GTRD no Liver (HepG2) 21384856
chr1 225652049 225654239 ZNF143 GTRD no Epithelial (MCF-7) 21384858
chr1 225652118 225653923 TCF7L2 GTRD no Colon (HCT116) 21384860
chr1 225652156 225654713 ZNF143 GTRD no Epithelial (MCF-7) 21384861
chr1 225652193 225654287 TCF7L2 GTRD no Colon (HCT116) 21384862
chr1 225652197 225654101 TCF7L2 GTRD no Colon (HCT116) 21384863
chr1 225652240 225654091 ZNF143 GTRD no Epithelial (MCF-7) 21384864
chr1 225652284 225653911 ZNF274 GTRD no Bone Marrow (K562) 21384865
chr1 225652298 225653998 ZNF274 GTRD no Bone Marrow (K562) 21384866
chr1 225652304 225654022 ZNF274 GTRD no Liver (HepG2) 21384867
chr1 225652309 225654340 TCF7L2 GTRD no Colon (HCT116) 21384869
chr1 225652316 225654155 TCF7L2 GTRD no Colon (HCT116) 21384870
chr1 225652323 225654188 TCF7L2 GTRD no Colon (HCT116) 21384871
chr1 225652328 225654133 TCF7L2 GTRD no Colon (HCT116) 21384872
chr1 225652353 225654151 TCF7L2 GTRD no Colon (HCT116) 21384873
chr1 225652359 225654110 ZNF143 GTRD no Epithelial (MCF-7) 21384874
chr1 225652409 225653996 ZNF274 GTRD no Liver (HepG2) 21384875
chr1 225652431 225654119 ZNF143 GTRD no Epithelial (MCF-7) 21384877
chr1 225652462 225653911 ZNF274 GTRD no Liver (HepG2) 21384878
chr1 225652472 225654160 TCF7L2 GTRD no Colon (HCT116) 21384879
chr1 225652479 225654106 TCF7L2 GTRD no Colon (HCT116) 21384880
chr1 225652499 225654138 ZNF143 GTRD no Epithelial (MCF-7) 21384881
chr1 225652503 225654001 TCF7L2 GTRD no Colon (HCT116) 21384882
chr1 225652508 225654057 TCF7L2 GTRD no Colon (HCT116) 21384884
chr1 225652520 225653878 TCF7L2 GTRD no Colon (HCT116) 21384886
chr1 225652604 225654163 ZNF143 GTRD no Epithelial (MCF-7) 21384889
chr1 225652613 225654204 ZNF274 GTRD no Liver (HepG2) 21384890
chr1 225652650 225654272 ZBTB33 GTRD no Brain (SK-N-SH) 21384891
chr1 225652729 225654213 ZBTB33 GTRD no Brain (SK-N-SH) 21384894
chr1 225652733 225654105 ZBTB33 GTRD no Brain (SK-N-SH) 21384895
chr1 225652784 225653940 ZNF143 GTRD no Epithelial (MCF-7) 21384900
chr1 225652807 225654246 ZNF274 GTRD no Liver (HepG2) 21384908
chr1 225652825 225654152 ZNF143 GTRD no Epithelial (MCF-7) 21384911
chr1 225652886 225654273 ZBTB33 GTRD no Brain (SK-N-SH) 21384917
chr1 225652902 225654206 ZNF274 GTRD no Liver (HepG2) 21384923
chr1 225652904 225654245 ZBTB33 GTRD no Brain (SK-N-SH) 21384925
chr1 225652905 225653879 TCF7L2 GTRD no Colon (HCT116) 21384926
chr1 225652914 225654148 ZBTB33 GTRD no Brain (SK-N-SH) 21384927
chr1 225653275 225654104 ZNF143 GTRD no Epithelial (MCF-7) 21384954
chr1 225653321 225654106 ZNF143 GTRD no Epithelial (MCF-7) 21384956
chr1 225653367 225654606 ZNF274 GTRD no Liver (HepG2) 21384957
chr1 225653398 225653839 ZNF274 GTRD no Liver (HepG2) 21384958
chr1 225653403 225654156 ZNF274 GTRD no Liver (HepG2) 21384959
chr1 225653404 225654169 ZNF274 GTRD no Liver (HepG2) 21384960
chr1 225653412 225653934 ZNF274 GTRD no Liver (HepG2) 21384961
chr1 225653414 225654105 ZNF143 GTRD no Epithelial (MCF-7) 21384962
chr1 225653425 225654092 ZNF143 GTRD no Epithelial (MCF-7) 21384963
chr1 225653431 225654251 ZNF274 GTRD no Liver (HepG2) 21384964
chr1 225653434 225654022 ZNF274 GTRD no Bone Marrow (K562) 21384965
chr1 225653435 225654133 ZNF143 GTRD no Epithelial (MCF-7) 21384966
chr1 225653469 225654203 ZNF274 GTRD no Liver (HepG2) 21384967
chr1 225653551 225654716 ZBTB33 GTRD no Brain (SK-N-SH) 21384968
chr1 225653563 225653893 ZNF274 GTRD no Bone Marrow (K562) 21384969
chr1 225653601 225654131 ZNF274 GTRD no Liver (HepG2) 21384970
chr1 225653604 225654556 ZNF274 GTRD no Liver (HepG2) 21384971
chr1 225653645 225654199 ZNF274 GTRD no Liver (HepG2) 21384972
chr1 225653693 225654158 ZNF274 GTRD no Liver (HepG2) 21384973
chr1 225653701 225654112 ZNF274 GTRD no Liver (HepG2) 21384974
chr1 225653770 225654152 ZNF274 GTRD no Liver (HepG2) 21384975
chr1 225653821 225653835 PLAG1 JASPAR yes 35744042
Genes associated with rs561996625[chr1:225653831], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More