EnhancerDB
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  3. rs562003822[chr2:228268250]
Enhancers that have rs562003822[chr2:228268250]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562003822[chr2:228268250]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228268232 228268252 RREB1 JASPAR yes 81519293
chr2 228268233 228268253 RREB1 JASPAR yes 81519294
chr2 228268237 228268257 RREB1 JASPAR yes 81519296
chr2 228268239 228268254 FOXA1 JASPAR yes 81519297
chr2 228268240 228268252 FOXI1 JASPAR yes 81519298
chr2 228268240 228268255 FOXP1 JASPAR yes 81519299
chr2 228268241 228268253 FOXC2 JASPAR yes 81519300
chr2 228268243 228268254 FOXA1 JASPAR yes 81519301
chr2 228268244 228268259 FOXP1 JASPAR yes 81519302
chr2 228268245 228268256 FOXP2 JASPAR yes 81519303
Genes associated with rs562003822[chr2:228268250], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More