EnhancerDB
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  3. rs562005070[chr6:11263921]
Enhancers that have rs562005070[chr6:11263921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11250905 11281835 enh23019
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
chr6 11263609 11264019 vista50797
VISTA
Transcript factors that have rs562005070[chr6:11263921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11263796 11264060 USF2 UCSC Txn Factor no Conserved 108538348
chr6 11263913 11263923 TBR1 JASPAR yes 70307674
chr6 11263913 11263923 TBR1 JASPAR yes 99870320
chr6 11263915 11263923 MGA JASPAR yes 70307675
chr6 11263915 11263923 TBX1 JASPAR yes 70307676
chr6 11263915 11263923 MGA JASPAR yes 99870321
chr6 11263915 11263923 TBX1 JASPAR yes 99870322
chr6 11263918 11263923 MYC TRANSFAC yes 70307677
chr6 11263918 11263923 USF1 TRANSFAC yes 70307678
chr6 11263918 11263923 USF2 TRANSFAC yes 70307679
chr6 11263918 11263923 MYC TRANSFAC yes 99870323
chr6 11263918 11263923 USF1 TRANSFAC yes 99870324
chr6 11263918 11263923 USF2 TRANSFAC yes 99870325
chr6 11263918 11263925 USF1 JASPAR yes 70307680
chr6 11263918 11263925 USF1 JASPAR yes 99870326
chr6 11263921 11263927 ZNF354C JASPAR yes 70307681
chr6 11263921 11263927 ZNF354C JASPAR yes 99870327
Genes associated with rs562005070[chr6:11263921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More