EnhancerDB
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  3. rs56202230[chr17:60176864]
Enhancers that have rs56202230[chr17:60176864]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60161225 60181195 enh32257
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs56202230[chr17:60176864]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60176807 60177111 TCF7L2 GTRD no Colon (HCT116) 21777747
chr17 60176852 60176864 PKNOX1 JASPAR yes 55181977
chr17 60176852 60176864 TGIF1 JASPAR yes 55181978
chr17 60176852 60176864 TGIF2 JASPAR yes 55181979
Genes associated with rs56202230[chr17:60176864], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More