EnhancerDB
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  3. rs562039532[chr17:56471259]
Enhancers that have rs562039532[chr17:56471259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56450725 56479661 enh4499
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Liver (HepG2)
Transcript factors that have rs562039532[chr17:56471259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56471246 56471261 MEF2C JASPAR yes 55017414
chr17 56471247 56471262 MEF2A JASPAR yes 55017415
chr17 56471248 56471260 MEF2A JASPAR yes 55017416
chr17 56471248 56471260 MEF2B JASPAR yes 55017417
chr17 56471248 56471260 MEF2D JASPAR yes 55017418
Genes associated with rs562039532[chr17:56471259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More