EnhancerDB
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  3. rs562041970[chr11:11994209]
Enhancers that have rs562041970[chr11:11994209]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 11991705 12017781 enh28595
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Uterus Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs562041970[chr11:11994209]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 11994198 11994216 RARA JASPAR yes 37406085
chr11 11994208 11994220 HES5 JASPAR yes 37406086
chr11 11994208 11994220 PKNOX1 JASPAR yes 37406087
chr11 11994208 11994220 PKNOX2 JASPAR yes 37406088
chr11 11994208 11994220 TGIF1 JASPAR yes 37406089
chr11 11994208 11994220 TGIF2 JASPAR yes 37406090
chr11 11994209 11994219 CLOCK JASPAR yes 37406091
chr11 11994209 11994219 NEUROG2 JASPAR yes 37406092
Genes associated with rs562041970[chr11:11994209], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More