EnhancerDB
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  3. rs562062042[chr12:52593575]
Enhancers that have rs562062042[chr12:52593575]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562062042[chr12:52593575]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52593362 52593746 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546608
chr12 52593570 52593576 SP1 TRANSFAC yes 120926875
chr12 52593571 52593576 SP1 TRANSFAC yes 120926876
chr12 52593571 52593582 E2F4 JASPAR yes 120926877
chr12 52593572 52593577 SP1 TRANSFAC yes 120926878
chr12 52593572 52593578 SP1 TRANSFAC yes 120926879
chr12 52593574 52593587 NFKB1 JASPAR yes 120926880
Genes associated with rs562062042[chr12:52593575], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More