EnhancerDB
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  3. rs56206244[chr12:121293507]
Enhancers that have rs56206244[chr12:121293507]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 121282565 121298722 enh2642
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673)
Transcript factors that have rs56206244[chr12:121293507]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 121293494 121293509 FOXP1 JASPAR yes 124190300
chr12 121293494 121293515 IRF1 JASPAR yes 124190301
chr12 121293495 121293510 FOXP1 JASPAR yes 124190302
chr12 121293497 121293512 FOXP1 JASPAR yes 124190303
chr12 121293498 121293519 IRF1 JASPAR yes 124190304
chr12 121293499 121293514 FOXP1 JASPAR yes 124190305
chr12 121293499 121293520 IRF1 JASPAR yes 124190306
chr12 121293503 121293524 IRF1 JASPAR yes 124190307
chr12 121293504 121293519 FOXP1 JASPAR yes 124190308
chr12 121293504 121293525 IRF1 JASPAR yes 124190309
Genes associated with rs56206244[chr12:121293507], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More