EnhancerDB
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  3. rs562072479[chr17:39005083]
Enhancers that have rs562072479[chr17:39005083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39001145 39015955 enh17144
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs562072479[chr17:39005083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39005070 39005085 NR2C2 JASPAR yes 54239930
chr17 39005071 39005091 RREB1 JASPAR yes 54239932
chr17 39005072 39005092 RREB1 JASPAR yes 54239935
chr17 39005072 39005093 ZNF263 JASPAR yes 54239936
chr17 39005073 39005083 SP1 JASPAR yes 54239937
chr17 39005073 39005083 ZNF740 JASPAR yes 54239938
chr17 39005073 39005093 RREB1 JASPAR yes 54239939
chr17 39005074 39005084 SP1 JASPAR yes 54239940
chr17 39005074 39005084 ZNF740 JASPAR yes 54239941
chr17 39005074 39005094 RREB1 JASPAR yes 54239942
chr17 39005074 39005095 ZNF263 JASPAR yes 54239943
chr17 39005075 39005085 SP1 JASPAR yes 54239944
chr17 39005075 39005085 ZNF740 JASPAR yes 54239945
chr17 39005076 39005086 SP1 JASPAR yes 54239946
chr17 39005076 39005086 ZNF740 JASPAR yes 54239947
chr17 39005077 39005087 SP1 JASPAR yes 54239948
chr17 39005077 39005087 ZNF740 JASPAR yes 54239949
chr17 39005078 39005088 SP1 JASPAR yes 54239950
chr17 39005078 39005088 ZNF740 JASPAR yes 54239951
chr17 39005078 39005098 RREB1 JASPAR yes 54239952
chr17 39005079 39005089 SP1 JASPAR yes 54239953
chr17 39005079 39005089 ZNF740 JASPAR yes 54239954
chr17 39005079 39005100 ZNF263 JASPAR yes 54239955
chr17 39005081 39005091 ZNF740 JASPAR yes 54239956
Genes associated with rs562072479[chr17:39005083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More