EnhancerDB
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  3. rs562074125[chr17:78721846]
Enhancers that have rs562074125[chr17:78721846]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs562074125[chr17:78721846]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 21797104
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 108307176
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 108307177
chr17 78721840 78721851 E2F1 JASPAR yes 56274502
chr17 78721841 78721852 E2F4 JASPAR yes 56274503
chr17 78721841 78721852 E2F6 JASPAR yes 56274504
chr17 78721842 78721847 SP1 TRANSFAC yes 56274505
Genes associated with rs562074125[chr17:78721846], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More