EnhancerDB
  1. Home
  2. SNP
  3. rs562113281[chr2:27955159]
Enhancers that have rs562113281[chr2:27955159]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27941049 27963575 enh18376
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs562113281[chr2:27955159]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27955141 27955161 RREB1 JASPAR yes 72586579
chr2 27955143 27955163 RREB1 JASPAR yes 72586581
chr2 27955145 27955165 RREB1 JASPAR yes 72586582
chr2 27955147 27955167 RREB1 JASPAR yes 72586583
chr2 27955149 27955169 RREB1 JASPAR yes 72586584
chr2 27955151 27955171 RREB1 JASPAR yes 72586585
chr2 27955152 27955172 RREB1 JASPAR yes 72586586
chr2 27955156 27955176 RREB1 JASPAR yes 72586587
chr2 27955158 27955178 RREB1 JASPAR yes 72586588
Genes associated with rs562113281[chr2:27955159], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More