EnhancerDB
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  3. rs56213496[chr1:235485614]
Enhancers that have rs56213496[chr1:235485614]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235474702 235486776 enh58233
Skin (Keratinocyte) Liver (HepG2) Prostate (RWPE1) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs56213496[chr1:235485614]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235485599 235485618 PITX2 TRANSFAC yes 36365685
chr1 235485605 235485618 ZBTB18 JASPAR yes 36365686
chr1 235485606 235485618 PKNOX1 JASPAR yes 36365687
chr1 235485606 235485618 TGIF1 JASPAR yes 36365688
chr1 235485607 235485616 SNAI2 JASPAR yes 36365689
chr1 235485607 235485617 FIGLA JASPAR yes 36365690
chr1 235485607 235485617 ID4 JASPAR yes 36365691
chr1 235485607 235485617 TCF3 JASPAR yes 36365692
chr1 235485607 235485617 TCF4 JASPAR yes 36365693
chr1 235485609 235485618 ZEB1 JASPAR yes 36365694
chr1 235485609 235485619 TBX21 JASPAR yes 36365695
chr1 235485609 235485620 TBX2 JASPAR yes 36365696
chr1 235485609 235485622 EOMES JASPAR yes 36365697
chr1 235485610 235485618 MGA JASPAR yes 36365698
chr1 235485610 235485618 TBX15 JASPAR yes 36365699
chr1 235485610 235485618 TBX1 JASPAR yes 36365700
chr1 235485610 235485618 TBX4 JASPAR yes 36365701
chr1 235485610 235485618 TBX5 JASPAR yes 36365702
chr1 235485610 235485620 TBR1 JASPAR yes 36365703
chr1 235485610 235485623 SMAD2 JASPAR yes 36365704
Genes associated with rs56213496[chr1:235485614], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More