EnhancerDB
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  3. rs562139965[chr17:74420948]
Enhancers that have rs562139965[chr17:74420948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 74401123 74447132 enh4607
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562139965[chr17:74420948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 74420927 74420948 IRF1 JASPAR yes 55998491
chr17 74420928 74420949 IRF1 JASPAR yes 55998493
chr17 74420933 74420948 FOXP1 JASPAR yes 55998497
chr17 74420934 74420949 FOXP1 JASPAR yes 55998498
chr17 74420934 74420949 MEF2C JASPAR yes 55998499
chr17 74420934 74420955 IRF1 JASPAR yes 55998500
chr17 74420936 74420951 FOXP1 JASPAR yes 55998501
chr17 74420940 74420961 IRF1 JASPAR yes 55998502
chr17 74420941 74420962 IRF1 JASPAR yes 55998503
chr17 74420943 74420958 FOXP1 JASPAR yes 55998505
chr17 74420947 74420962 FOXP1 JASPAR yes 55998506
chr17 74420948 74420960 FOXC2 JASPAR yes 55998507
Genes associated with rs562139965[chr17:74420948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More