EnhancerDB
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  3. rs562146539[chr19:2593782]
Enhancers that have rs562146539[chr19:2593782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2585524 2605695 enh17851
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs562146539[chr19:2593782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2593776 2593797 IRF1 JASPAR yes 112079799
chr19 2593778 2593793 PRDM1 JASPAR yes 112079800
chr19 2593778 2593793 STAT2 JASPAR yes 112079801
chr19 2593781 2593796 FOXP1 JASPAR yes 112079802
chr19 2593782 2593797 FOXP1 JASPAR yes 112079803
Genes associated with rs562146539[chr19:2593782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More