EnhancerDB
  1. Home
  2. SNP
  3. rs562154948[chr12:96850960]
Enhancers that have rs562154948[chr12:96850960]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562154948[chr12:96850960]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96850889 96851393 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21567789
chr12 96850954 96850967 NFKB1 JASPAR yes 123074048
chr12 96850958 96850979 ZNF263 JASPAR yes 123074049
chr12 96850959 96850969 ZNF740 JASPAR yes 123074050
Genes associated with rs562154948[chr12:96850960], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More