EnhancerDB
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  3. rs562173564[chr1:36707178]
Enhancers that have rs562173564[chr1:36707178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 36701987 36724964 enh240
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562173564[chr1:36707178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 36707172 36707193 IRF1 JASPAR yes 28128647
chr1 36707173 36707194 IRF1 JASPAR yes 28128648
chr1 36707175 36707196 IRF1 JASPAR yes 28128649
chr1 36707176 36707197 IRF1 JASPAR yes 28128650
chr1 36707177 36707192 FOXP1 JASPAR yes 28128651
chr1 36707177 36707198 IRF1 JASPAR yes 28128652
chr1 36707178 36707193 FOXP1 JASPAR yes 28128653
Genes associated with rs562173564[chr1:36707178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More