EnhancerDB
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  3. rs562183077[chr1:151908056]
Enhancers that have rs562183077[chr1:151908056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151885865 151921875 enh624
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs562183077[chr1:151908056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151906905 151911039 ZNF143 GTRD no Epithelial (MCF-7) 21338207
chr1 151906905 151911039 ZNF143 GTRD no Epithelial (MCF-7) 107829639
chr1 151907102 151908600 ZNF274 GTRD no Bone Marrow (K562) 21338208
chr1 151907151 151910853 ZNF274 GTRD no Bone Marrow (K562) 21338209
chr1 151907151 151910853 ZNF274 GTRD no Bone Marrow (K562) 107829640
chr1 151907155 151908566 ZNF274 GTRD no Bone Marrow (K562) 21338210
chr1 151907174 151910717 ZNF143 GTRD no Epithelial (MCF-7) 21338211
chr1 151907174 151910717 ZNF143 GTRD no Epithelial (MCF-7) 107829641
chr1 151907253 151908853 ZNF143 GTRD no Epithelial (MCF-7) 21338214
chr1 151907305 151908734 TCF7L2 GTRD no Colon (HCT116) 21338215
chr1 151907341 151908130 ZNF274 GTRD no Bone Marrow (K562) 21338217
chr1 151907353 151908658 ZNF274 GTRD no Bone Marrow (K562) 21338219
chr1 151907363 151908098 ZNF143 GTRD no Epithelial (MCF-7) 21338220
chr1 151907445 151908162 ZNF143 GTRD no Epithelial (MCF-7) 21338222
chr1 151907457 151908123 ZNF274 GTRD no Bone Marrow (K562) 21338223
chr1 151907522 151910939 ZNF274 GTRD no Bone Marrow (K562) 21338226
chr1 151907522 151910939 ZNF274 GTRD no Bone Marrow (K562) 107829642
chr1 151907617 151908106 ZNF143 GTRD no Epithelial (MCF-7) 21338227
chr1 151907632 151908106 TCF7L2 GTRD no Colon (HCT116) 21338228
chr1 151907714 151908175 ZNF143 GTRD no Epithelial (MCF-7) 21338229
chr1 151907739 151908071 ZNF274 GTRD no Blood (GM12878) 21338230
chr1 151907822 151910185 ZNF143 GTRD no Epithelial (MCF-7) 21338231
chr1 151907822 151910185 ZNF143 GTRD no Epithelial (MCF-7) 107829643
chr1 151907881 151908718 ZNF274 GTRD no Bone Marrow (K562) 21338232
chr1 151907927 151909000 ZNF274 GTRD no Bone Marrow (K562) 21338233
chr1 151907927 151910137 ZNF274 GTRD no Bone Marrow (K562) 21338234
chr1 151907927 151910137 ZNF274 GTRD no Bone Marrow (K562) 107829644
chr1 151907933 151910727 ZNF274 GTRD no Bone Marrow (K562) 21338235
chr1 151907933 151910727 ZNF274 GTRD no Bone Marrow (K562) 107829645
chr1 151907940 151910854 ZNF274 GTRD no Blood (GM12878) 21338236
chr1 151907940 151910854 ZNF274 GTRD no Blood (GM12878) 107829646
chr1 151907941 151910590 ZNF274 GTRD no Bone Marrow (K562) 21338237
chr1 151907941 151910590 ZNF274 GTRD no Bone Marrow (K562) 107829647
chr1 151907946 151909794 ZNF274 GTRD no Cervix (HeLa-S3) 21338238
chr1 151907946 151909794 ZNF274 GTRD no Cervix (HeLa-S3) 107829648
chr1 151907972 151908909 TCF7L2 GTRD no Colon (HCT116) 21338239
chr1 151908022 151908935 ZNF274 GTRD no Blood (GM12878) 21338240
chr1 151908024 151909985 ZNF143 GTRD no Epithelial (MCF-7) 21338241
chr1 151908024 151909985 ZNF143 GTRD no Epithelial (MCF-7) 107829649
chr1 151908039 151908934 ZNF143 GTRD no Epithelial (MCF-7) 21338242
chr1 151908041 151908603 ZNF274 GTRD no Blood (GM12878) 21338243
chr1 151908053 151908066 SMAD2 JASPAR yes 32204498
Genes associated with rs562183077[chr1:151908056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More