EnhancerDB
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  3. rs56218802[chr12:58237127]
Enhancers that have rs56218802[chr12:58237127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58223192 58238686 enh14761
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56218802[chr12:58237127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58237108 58237129 IRF1 JASPAR yes 121142369
chr12 58237115 58237130 LEF1 JASPAR yes 121142370
chr12 58237116 58237130 TCF7L2 JASPAR yes 121142371
Genes associated with rs56218802[chr12:58237127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More