EnhancerDB
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  3. rs562193179[chr16:87491705]
Enhancers that have rs562193179[chr16:87491705]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87488525 87523615 enh16897
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562193179[chr16:87491705]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87489245 87492157 ZNF274 GTRD no Liver (HepG2) 21733328
chr16 87489245 87492157 ZNF274 GTRD no Liver (HepG2) 108219266
chr16 87490403 87492300 ZNF274 GTRD no Liver (HepG2) 21733346
chr16 87490403 87492300 ZNF274 GTRD no Liver (HepG2) 108219284
chr16 87490431 87492349 ZNF274 GTRD no Liver (HepG2) 21733347
chr16 87490431 87492349 ZNF274 GTRD no Liver (HepG2) 108219285
chr16 87490586 87492343 ZNF274 GTRD no Liver (HepG2) 21733355
chr16 87490586 87492343 ZNF274 GTRD no Liver (HepG2) 108219293
chr16 87490623 87492345 ZNF274 GTRD no Liver (HepG2) 21733357
chr16 87490623 87492345 ZNF274 GTRD no Liver (HepG2) 108219295
chr16 87491700 87491715 FOXP1 JASPAR yes 12217678
chr16 87491700 87491721 IRF1 JASPAR yes 12217679
chr16 87491702 87491717 FOXP1 JASPAR yes 12217680
chr16 87491703 87491718 FOXP1 JASPAR yes 12217681
chr16 87491704 87491719 FOXP1 JASPAR yes 12217682
chr16 87491705 87491720 FOXP1 JASPAR yes 12217683
chr16 87491705 87491726 IRF1 JASPAR yes 12217684
Genes associated with rs562193179[chr16:87491705], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More