EnhancerDB
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  3. rs562197015[chr1:185627543]
Enhancers that have rs562197015[chr1:185627543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs562197015[chr1:185627543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185626832 185627819 ZNF143 GTRD no Epithelial (MCF-7) 21359483
chr1 185626885 185627833 ZNF143 GTRD no Epithelial (MCF-7) 21359484
chr1 185626916 185627831 ZNF143 GTRD no Epithelial (MCF-7) 21359485
chr1 185626946 185627749 ZNF143 GTRD no Epithelial (MCF-7) 21359486
chr1 185626955 185627776 ZNF143 GTRD no Epithelial (MCF-7) 21359487
chr1 185626980 185627737 ZNF143 GTRD no Epithelial (MCF-7) 21359488
chr1 185626989 185627640 ZNF143 GTRD no Epithelial (MCF-7) 21359489
chr1 185626994 185627629 ZNF143 GTRD no Epithelial (MCF-7) 21359490
chr1 185627026 185627595 ZNF143 GTRD no Epithelial (MCF-7) 21359491
chr1 185627037 185627824 ZNF143 GTRD no Epithelial (MCF-7) 21359492
chr1 185627042 185627746 ZNF143 GTRD no Epithelial (MCF-7) 21359493
chr1 185627079 185627556 ZNF143 GTRD no Epithelial (MCF-7) 21359495
chr1 185627094 185627712 ZNF143 GTRD no Epithelial (MCF-7) 21359496
chr1 185627097 185627720 ZNF274 GTRD no Liver (HepG2) 21359497
chr1 185627152 185627600 ZNF274 GTRD no Liver (HepG2) 21359499
chr1 185627157 185627618 ZNF143 GTRD no Epithelial (MCF-7) 21359500
chr1 185627160 185627555 ZNF274 GTRD no Liver (HepG2) 21359501
chr1 185627203 185627547 ZNF143 GTRD no Epithelial (MCF-7) 21359503
chr1 185627209 185627683 ZNF143 GTRD no Epithelial (MCF-7) 21359504
chr1 185627211 185627633 ZNF274 GTRD no Liver (HepG2) 21359505
chr1 185627533 185627543 NFATC3 JASPAR yes 33832072
Genes associated with rs562197015[chr1:185627543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More