EnhancerDB
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  3. rs562219972[chr14:55773637]
Enhancers that have rs562219972[chr14:55773637]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55762685 55778955 enh3215
Skin (Keratinocyte) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs562219972[chr14:55773637]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55773629 55773640 CDX2 JASPAR yes 115541370
chr14 55773630 55773641 HOXA10 JASPAR yes 115541371
chr14 55773630 55773646 SOX8 JASPAR yes 115541372
chr14 55773631 55773640 CDX1 JASPAR yes 115541373
chr14 55773631 55773641 HOXA13 JASPAR yes 115541374
chr14 55773631 55773641 HOXB13 JASPAR yes 115541375
chr14 55773631 55773641 HOXD13 JASPAR yes 115541376
chr14 55773636 55773652 SOX8 JASPAR yes 115541377
Genes associated with rs562219972[chr14:55773637], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More