EnhancerDB
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  3. rs562251728[chr12:50931108]
Enhancers that have rs562251728[chr12:50931108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562251728[chr12:50931108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50931096 50931112 POU4F3 JASPAR yes 120840285
chr12 50931098 50931112 POU4F1 JASPAR yes 120840286
chr12 50931103 50931117 ONECUT3 JASPAR yes 120840287
chr12 50931104 50931115 BATF JASPAR yes 120840288
Genes associated with rs562251728[chr12:50931108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More