EnhancerDB
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  3. rs562263374[chr17:40402941]
Enhancers that have rs562263374[chr17:40402941]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs562263374[chr17:40402941]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40402938 40402953 FOXP1 JASPAR yes 54289547
chr17 40402939 40402954 FOXP1 JASPAR yes 54289548
chr17 40402940 40402955 FOXP1 JASPAR yes 54289549
chr17 40402940 40402961 IRF1 JASPAR yes 54289550
chr17 40402941 40402956 FOXP1 JASPAR yes 54289551
chr17 40402941 40402962 IRF1 JASPAR yes 54289552
Genes associated with rs562263374[chr17:40402941], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More