EnhancerDB
  1. Home
  2. SNP
  3. rs562284561[chr1:53876930]
Enhancers that have rs562284561[chr1:53876930]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53871953 53884901 enh26703
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs562284561[chr1:53876930]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53876924 53876939 TFAP2C JASPAR yes 28929759
chr1 53876926 53876938 INSM1 JASPAR yes 28929760
chr1 53876927 53876938 TFAP2A JASPAR yes 28929761
chr1 53876927 53876938 TFAP2B JASPAR yes 28929762
chr1 53876927 53876938 TFAP2C JASPAR yes 28929763
chr1 53876928 53876937 TFAP2A JASPAR yes 28929764
Genes associated with rs562284561[chr1:53876930], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More