EnhancerDB
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  3. rs562288524[chr16:87613218]
Enhancers that have rs562288524[chr16:87613218]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87612365 87620231 enh16898
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs562288524[chr16:87613218]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87613208 87613219 CDX2 JASPAR yes 12230097
chr16 87613209 87613220 HOXA10 JASPAR yes 12230098
chr16 87613209 87613220 HOXC11 JASPAR yes 12230099
chr16 87613209 87613220 HOXC12 JASPAR yes 12230100
chr16 87613209 87613220 HOXD12 JASPAR yes 12230101
chr16 87613210 87613219 CDX1 JASPAR yes 12230102
chr16 87613210 87613220 HOXA13 JASPAR yes 12230103
chr16 87613210 87613220 HOXC10 JASPAR yes 12230104
chr16 87613210 87613220 HOXD11 JASPAR yes 12230105
chr16 87613210 87613225 FOXP1 JASPAR yes 12230106
chr16 87613213 87613224 FOXP2 JASPAR yes 12230107
Genes associated with rs562288524[chr16:87613218], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More