EnhancerDB
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  3. rs562290650[chr12:109218533]
Enhancers that have rs562290650[chr12:109218533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109212325 109229815 enh14978
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Uterus Blood (T-cell) Heart
Transcript factors that have rs562290650[chr12:109218533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109218526 109218541 LEF1 JASPAR yes 123623378
chr12 109218533 109218554 IRF1 JASPAR yes 123623379
Genes associated with rs562290650[chr12:109218533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More