EnhancerDB
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  3. rs56229277[chr12:116759980]
Enhancers that have rs56229277[chr12:116759980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116750365 116765315 enh15024
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs56229277[chr12:116759980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116759426 116760236 ZNF274 GTRD no Blood (GM12878) 21576199
chr12 116759432 116760236 ZNF274 GTRD no Blood (GM12878) 21576200
chr12 116759637 116760145 ZNF274 GTRD no Blood (GM12878) 21576201
chr12 116759658 116760133 ZNF274 GTRD no Blood (GM12878) 21576202
chr12 116759669 116760066 ZNF274 GTRD no Blood (GM12878) 21576203
chr12 116759688 116760132 ZNF274 GTRD no Blood (GM12878) 21576204
chr12 116759697 116760086 ZNF274 GTRD no Blood (GM12878) 21576205
chr12 116759697 116760091 ZNF274 GTRD no Blood (GM12878) 21576206
chr12 116759726 116760082 ZNF274 GTRD no Blood (GM12878) 21576207
chr12 116759729 116760086 ZNF274 GTRD no Blood (GM12878) 21576208
chr12 116759979 116759989 SP1 JASPAR yes 123980768
chr12 116759980 116759984 LFA1 TRANSFAC yes 123980769
Genes associated with rs56229277[chr12:116759980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More