EnhancerDB
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  3. rs562296017[chr1:7619469]
Enhancers that have rs562296017[chr1:7619469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7605943 7624475 enh41
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs562296017[chr1:7619469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7619455 7619474 CTCF JASPAR yes 26477002
chr1 7619460 7619473 TFAP2A JASPAR yes 26477004
chr1 7619460 7619473 TFAP2B JASPAR yes 26477005
chr1 7619460 7619473 TFAP2C JASPAR yes 26477006
chr1 7619461 7619473 TFAP2A JASPAR yes 26477008
Genes associated with rs562296017[chr1:7619469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More