EnhancerDB
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  3. rs562297671[chr17:48922211]
Enhancers that have rs562297671[chr17:48922211]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48919785 48943275 enh4463
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs562297671[chr17:48922211]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48922202 48922216 TLX1 JASPAR yes 54724380
chr17 48922202 48922217 JUND JASPAR yes 54724381
chr17 48922203 48922216 JUN JASPAR yes 54724382
chr17 48922204 48922218 BATF3 JASPAR yes 54724383
chr17 48922205 48922217 JDP2 JASPAR yes 54724384
chr17 48922211 48922221 SREBF1 JASPAR yes 54724385
chr17 48922211 48922221 SREBF2 JASPAR yes 54724386
Genes associated with rs562297671[chr17:48922211], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More