EnhancerDB
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  3. rs562323999[chr16:85357838]
Enhancers that have rs562323999[chr16:85357838]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562323999[chr16:85357838]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85356028 85357863 ZNF143 GTRD no Epithelial (MCF-7) 21723518
chr16 85356028 85357863 ZNF143 GTRD no Epithelial (MCF-7) 108213811
chr16 85356040 85357907 TCF7L2 GTRD no Colon (HCT116) 21723519
chr16 85356040 85357907 TCF7L2 GTRD no Colon (HCT116) 108213812
chr16 85356821 85357847 ZNF143 GTRD no Epithelial (MCF-7) 21723527
chr16 85357134 85357840 TCF7L2 GTRD no Colon (HCT116) 21723532
chr16 85357433 85357849 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723533
chr16 85357716 85359955 ZNF274 GTRD no Bone Marrow (K562) 21723534
chr16 85357804 85360071 ZNF274 GTRD no Bone Marrow (K562) 21723535
chr16 85357816 85358441 ZNF274 GTRD no Bone Marrow (K562) 21723536
chr16 85357828 85357843 RFX5 JASPAR yes 12047431
chr16 85357837 85357841 LFA1 TRANSFAC yes 12047432
Genes associated with rs562323999[chr16:85357838], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More