EnhancerDB
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  3. rs562325424[chr16:69560501]
Enhancers that have rs562325424[chr16:69560501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69559096 69575635 enh4114
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs562325424[chr16:69560501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69560484 69560505 IRF1 JASPAR yes 11277115
chr16 69560486 69560501 STAT2 JASPAR yes 11277116
chr16 69560487 69560501 STAT1 JASPAR yes 11277117
chr16 69560488 69560503 IRF9 JASPAR yes 11277118
chr16 69560490 69560505 FOXP1 JASPAR yes 11277119
chr16 69560490 69560511 ZNF263 JASPAR yes 11277120
chr16 69560494 69560515 ZNF263 JASPAR yes 11277121
chr16 69560497 69560502 ETS2 TRANSFAC yes 11277122
chr16 69560497 69560518 ZNF263 JASPAR yes 11277123
chr16 69560500 69560509 PITX3 JASPAR yes 11277124
chr16 69560500 69560510 GSC2 JASPAR yes 11277125
chr16 69560500 69560510 GSC JASPAR yes 11277126
chr16 69560501 69560509 OTX1 JASPAR yes 11277127
chr16 69560501 69560509 OTX2 JASPAR yes 11277128
chr16 69560501 69560509 RHOXF1 JASPAR yes 11277129
Genes associated with rs562325424[chr16:69560501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More