EnhancerDB
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  3. rs562327346[chr1:180490637]
Enhancers that have rs562327346[chr1:180490637]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs562327346[chr1:180490637]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180489779 180490857 TEF1 GTRD no Bone (Osteoblast) 21353313
chr1 180490603 180490999 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21353321
chr1 180490608 180490984 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21353322
chr1 180490626 180490637 FOSL2 JASPAR yes 33520389
chr1 180490628 180491018 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353323
chr1 180490634 180491090 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353324
chr1 180490635 180490975 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21353325
Genes associated with rs562327346[chr1:180490637], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More