EnhancerDB
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  3. rs562346485[chr5:149180249]
Enhancers that have rs562346485[chr5:149180249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149167853 149192675 enh8796
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562346485[chr5:149180249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149180243 149180260 ESR1 JASPAR yes 66846550
chr5 149180244 149180254 SP1 JASPAR yes 66846551
chr5 149180244 149180261 RXRA JASPAR yes 66846552
chr5 149180244 149180264 ESR1 JASPAR yes 66846553
chr5 149180245 149180249 LFA1 TRANSFAC yes 66846554
chr5 149180245 149180257 INSM1 JASPAR yes 66846555
Genes associated with rs562346485[chr5:149180249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More