EnhancerDB
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  3. rs562361661[chr1:16513817]
Enhancers that have rs562361661[chr1:16513817]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562361661[chr1:16513817]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16513814 16513829 FOXP1 JASPAR yes 27033134
chr1 16513815 16513830 FOXP1 JASPAR yes 27033135
chr1 16513816 16513822 TBP TRANSFAC yes 27033136
chr1 16513816 16513831 FOXP1 JASPAR yes 27033137
chr1 16513816 16513837 IRF1 JASPAR yes 27033138
chr1 16513817 16513832 FOXP1 JASPAR yes 27033139
chr1 16513817 16513838 IRF1 JASPAR yes 27033140
Genes associated with rs562361661[chr1:16513817], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More